load linkloci.dat
scan ped.dat
score ALL 
#analysis BOTH
#analysis LOD
#analysis NPL 
#score PAIRS
#score ALL 
#units cM
#units rec-frac 
#maxiter 5000
#increment step 5
#seed 123456789
#reweight
#total stat
#process order  1 2 3 4 5 
#interference 19 m=0
#debug
#file 0
