[Infile for Example 2: Computing a Gene Tree Distribution]

begin coal;

  ntax = 4;
  taxa names = A B C D;
  gene tree file = ex2_genetrees.tre;
  species tree file = ex2_speciestree.tre;
  intra = no;
  ngtrees = 15;
  nstrees = 1;
  blstyle = none; [branch lengths read from file]
  logfile = ex2_logfile.log;
  outfile = ex2_output.out / gtopo probs;

end;

