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Liu, Yu, and Pearl. (2010) Maximum Tree: a consistent estimator of the species tree. Journal of Mathematical Biology 60:95-106. [more]

Pollack, Pan, and Pearl (2010). Concentration of specific amino adcids at the catalytic/active centers of highly-conserved housekeeping enzymes of central metabolism in Archaea, Bacteria, and Eukaryota: Is there a widely conserved chemical signal of prebiotic assembly?. Origins of Life and Evolution in Biospheres 40:273-302. [more]

Castillo-Ramirez, Liu, Pearl, and Edwards (2010). Bayesian estimation of species trees: a practical guide to optimal sampling and analysis. Estimating Species Trees (Knowles and Kubatko, eds). Chapter 2: 15-34. [more]