Software (For running on Linux; in a zipped, tar file)
PURPOSE:
R package that performs five statistical tests (t, MethMAGE, and three mean vector
tests) to find regions that are differentially methylated using MethylCap-Seq data
that have been processed by PrEMeR-CG.
The package may be downloaded from the links below or from https://cran.r-project.org/web/packages/MethylCapSig/index.html.
Software (For running on Linux; in a zipped, tar file)
Software (For running on Mac; in a gzip-compressed archive file)
Software (For running on Windows; in a zipped file)
Instructions
for installing and runing MethylCap-Sig.
Complete Manual
(pdf file)
References:
If you have any questions, please email Deepak Ayyala at deepaknagayyala@gmail.com
or Shili Lin at shili@stat.osu.edu